TīmeklisWhat is the difference between RAP-DB and MSU Rice Genome Annotation Project (RGAP)? Currently, both RAP-DB and MSU RGAP 7 use a common genome sequence “Os-Nipponbare-Reference-IRGSP-1.0” as a reference. However, the genome annotations are not exactly the same since annotation pipelines are different … TīmeklisRice Genome Annotation Project BLAST Search Select type of BLAST Search Search a nucleotide database using a nucleotide query sequence. Select database Select …
RAP-DB - Database Commons - CNCB
Tīmeklis2016. gada 22. marts · The Rice Genome. The rice genome was one of the few truly multinational plant genome projects, one with flags planted in chromosomes (Eckardt 2000)—Japan, chromosomes 1, 6, 7 & 8; US, chromosomes 3 & 10; China, chromosome 4; France, chromosome 12; Taiwan, chromosome 5; etc.—like early … TīmeklisOver the past 10 years, genomes of cultivated rice cultivars and their wild counterparts have been sequenced although most efforts are focused on genome assembly and annotation of two major cultivated rice (Oryza sativa L.) subspecies, 93-11 (indica) and Nipponbare (japonica). To integrate informati … sharky caps dosis
The Rice Genome Knowledgebase (RGKbase): an annotation
TīmeklisInternational Rice Research Institute; Rice Genome Annotation Project; The Rice Annotation Project (RAP) Assembly : Name : IRGSP 1.0 : NCBI BioProject: PRJNA122: Reference : 10.1186/1939-8433-6-4 Annotation : Source : RAP : MSU : Gramene(+IsoSeq) Locus Tag Prefix : Os : LOC_Os : TīmeklisWe have provided a resource to extend the annotation of the rice genome to other plant species by providing comparative alignments to other plant species. We have … Tīmeklis2011. gada 31. okt. · The Rice Genome Annotation Project Database and Resource is a National Science Foundation project and provides sequence and annotation data … sharky caps precio